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As the CMIV researchers are also affiliated to a home department at ¸£Àû¼§ or another university and their research is primarily registered there it can be difficult to overview. Here you will find a selection of the latest publications registered in the DiVA database.

research discussion Photo credit Emma Busk Winquist

Publications

Recent publications

03 Nov, 2025

Reply to "Exploring the role of lipid biomarkers in linking dysglicemia to subclinical atherosclerosis" from Guo-Ming Zhang and Yanmin Song

10 Sep, 2025

Nocturnal gastro-oesophageal reflux and pulmonary abnormalities on chest CT in a general population: the Swedish CArdioPulmonary BioImage Study

Background Nocturnal gastro-oesophageal reflux (nGER) is common in people with respiratory diseases, but its association with pulmonary abnormalities is not known.Aim Investigate the association between nGER and pulmonary abnormalities on chest CT in an adult general population.Methods In total, 28 846 individuals from the general population aged 50-64 years completed questionnaires and underwent chest CT, in the Swedish CArdioPulmonary BioImage Study (www.scapis.org). Participants with nGER symptoms on >= 1 night per week were defined as having nGER. Chest CT was evaluated for bronchial wall thickening, bronchiectasis, reticular abnormalities, honeycombing, cysts and ground glass opacities. Ever-smoking, current asthma, inflammatory bowel disease and autoimmune disease were defined as risk factors for pulmonary abnormalities. Analyses were adjusted for sex, age, body mass index, education level and study centre.Results The prevalence of nGER was 9.4%. Among participants with risk factors for pulmonary abnormalities (n=4004), having nGER was positively associated with bronchial wall thickening (adjusted OR (aOR) (95% CI): 1.25 (1.07 to 1.48)) and reticular abnormalities (aOR (95% CI): 1.51 (1.04 to 2.17)), but negatively associated with cysts (aOR (95% CI): 0.68 (0.48 to 0.97)). Among participants without risk factors for CT abnormalities (n=2555), nGER did not relate with pulmonary abnormalities.Conclusions In a middle-aged general population, nGER was not associated with pulmonary abnormalities on chest CT. However, in the presence of other risk factors for pulmonary abnormalities, nGER was associated with bronchial wall thickening and reticular abnormalities. Persons with nGER and risk factors for pulmonary abnormalities should, therefore, be evaluated for respiratory disease and treated appropriately.

21 Oct, 2024

Pediatric brain tumor classification using digital pathology and deep learning : Evaluation of SOTA methods on a multi-center Swedish cohort

Brain tumors are the most common solid tumors in children and young adults, but the scarcity of large histopathology datasets has limited the application of computational pathology in this group. This study implements two weakly supervised multiple-instance learning (MIL) approaches on patch features obtained from state-of-the-art histology-specific foundation models to classify pediatric brain tumors in hematoxylin and eosin whole slide images (WSIs) from a multi-center Swedish cohort. WSIs from 540 subjects (age 8.5 ± 4.9 years) diagnosed with brain tumors were gathered from the six Swedish university hospitals. Instance (patch)-level features were obtained from WSIs using three pre-trained feature extractors: ResNet50, UNI, and CONCH. Instances were aggregated using attention-based MIL (ABMIL) or clustering-constrained attention MIL (CLAM) for patient-level classification. Models were evaluated on three classification tasks based on the hierarchical classification of pediatric brain tumors: tumor category, family, and type. Model generalization was assessed by training on data from two of the centers and testing on data from four other centers. Model interpretability was evaluated through attention mapping. The highest classification performance was achieved using UNI features and ABMIL aggregation, with Matthew's correlation coefficient of 0.76 ± 0.04, 0.63 ± 0.04, and 0.60 ± 0.05 for tumor category, family, and type classification, respectively. When evaluating generalization, models utilizing UNI and CONCH features outperformed those using ResNet50. However, the drop in performance from the in-site to out-of-site testing was similar across feature extractors. These results show the potential of state-of-the-art computational pathology methods in diagnosing pediatric brain tumors at different hierarchical levels with fair generalizability on a multi-center national dataset.

2026

Shan Cai, Christian Simonsson, Markus Karlsson, Wile Balkhed, Jens Tellman, Simone Ignatova, Patrik Nasr, Mattias Ekstedt, Stergios Kechagias, Wolf Bartholomä, Nils Dahlström, Peter Lundberg (2026) Journal of Magnetic Resonance Imaging, Article jmri.70319 (Article in journal)
Jonas Eriksson Strom, Ida Pesonen, Per Liv, Anders Andersson, Apostolos Bossios, Arne Egesten, Magnus Ekstrom, Jan Engvall, Elin Good, Ola Hammarsten, Jonas Holm, Christer Janson, Ase Johnsson, Lars Lind, Eva Lindberg, Anders Linden, Andrei Malinovschi, Anna Moberg, Ulf Nilsson, Emma Palmqvist, Magnus Skold, Josefin Sundh, Hanan A. Tanash, Suneela Zaigham, Anders Blomberg (2026) Thorax (Article in journal)
Filip Hammaréus, Lennart Nilsson, Rosanna Chung, Fredrik H Nyström, Carl Johan Östgren, Lena Jonasson (2026) Scientific Reports, Vol. 16, Article 9965 (Article in journal)
Elin Good, Oscar Soto, Linda Bilos, Håkan Ahlström, Tamara Bianchessi, Jan Engvall, Isabel Gonçalves, My Troung, Ola Hjelmgren, David Marlevi, Bertil Wegmann, Petter Dyverfeldt (2026) Journal of Cardiovascular Magnetic Resonance, Article 102686 (Article in journal)
Misgina Tsighe Hagos, Antti Suutala, Dmitrii Bychkov, Hakan Kucukel, Joar von Bahr, Milda Poceviciute, Johan Lundin, Nina Linder, Claes Lundström (2026) Scientific Reports, Vol. 16, Article 9649 (Article in journal)
Henrik Podéus Derelöv, Christian Simonsson, Gerd Jakobsson, Robert Kronstrand, Elin Nyman, William Lövfors, Gunnar Cedersund (2026) Scientific Reports, Vol. 16, Article 9336 (Article in journal)
S. L. Sundland, L. L. Lundvall, Håkan Gustafsson, Tomas Bjerner, Johan Kihlberg (2026) Radiography, Vol. 32, Article 103395 (Article in journal)
Xiangyu Qiao, Vanessa William Toma, Jing Wang, Ángel Herraiz-Adillo, Simon Söderholm, Daniel Berglind, Susanna Calling, Bledar Daka, Mats Martinell, Frida Bergman, Pontus Henriksson, Bijar Ghafouri, Martin Ulander, Carl Johan Östgren, Claudio Cantù, Wen Zhong, Fredrik Iredahl (2026) Scientific Reports, Vol. 16, Article 9652 (Article in journal)
Gunnel Peterson, Erika Andersson, Margaretha Jonsson, Anneli Peolsson (2026) Scientific Reports, Vol. 16, Article 7725 (Article in journal)
Jacques Reis, Alain Buguet, Zeliha Tulek, Alain Froment, Anne-Marie Landtblom, Manny W. Radomski, Serefnur Ozturk, Mohammed Wasay, Ulf Kallweit, Gustavo C. Roman, Chafiq Hicham, Emmeline Lagrange, Peter S. Spencer (2026) Journal of the Neurological Sciences, Vol. 483, Article 125836 (Article in journal)
Simon Söderholm, Martin Ulander, Vanessa William Toma, Sara Kaufmann, Xiangyu Qiao, Daniel Berglind, Susanna Calling, Bledar Daka, Ludger Grote, Mats Martinell, Frida Bergman, Pontus Henriksson, Carl Johan Östgren, Wen Zhong, Claudio Cantù, Fredrik Iredahl (2026) PLOS ONE, Vol. 21, Article e0344479 (Article in journal)
Joanna Kvist, Angie Liu, Nicola Giannotti, Stephanie Filbay, Henrik Hedevik, Anders Stalman, Richard Frobell, Håkan Gauffin, Martin Englund (2026) Journal of Orthopaedic and Sports Physical Therapy, Vol. 56, p. 209-219 (Article in journal)
Emily L. Clarke, Derek Magee, Julia Newton-bishop, Gerald Saldanha, William Merchant, Marlous Hall, Robert Insall, Nigel G. Maher, Richard A. Scolyer, Grace Farnworth, Anisah Ali, Mark Bamford, Eva Sticova, Petr Kujal, Sally O'shea, Darren Treanor (2026) The journal of pathology. Clinical research, Vol. 12, Article e70075 (Article in journal)
Mischa Woisetschläger, Evangelia Baldimtsi, Maria Lindblom, Thomas Davidson, Tomas Bjerner, Anna Spångeus (2026) Osteoporosis International (Article in journal)
Johan Korduner, Hannes Holm Isholth, Amra Jujic, Gunnar Engstrom, David Kylhammar, Jan Engvall, Martin Magnusson, Anders Gottsater, Peter M. Nilsson (2026) BMC Cardiovascular Disorders, Vol. 26, Article 180 (Article in journal)
Per Nyman, Rafael Holmgren, Emma Nordh, Anna Ljusberg, Oscar Snödahl, Frederik Testud, Ida Blystad, Peter Lundberg, Anders Tisell (2026) PLOS ONE, Vol. 21, Article e0332562 (Article in journal)
Ryann Tansey, Irene Perini, Gavin N. Petrie, Connor James Haggarty, Raegan Mary Rose Mazurka, Adam Yngve, Sarah Mina, Madeleine Jones, Hilda Engelbrektsson, Andrea Johansson Capusan, Matthew N. Hill, Markus Heilig, Leah Mayo (2026) Translational Psychiatry, Vol. 16, Article 95 (Article in journal)
Jonathan Brandt, Rico Perlbach, Johan Sköld, Daphne Wezenberg, Mischa Woisetschläger, Jörg Schilcher (2026) Bone & Joint Open, Vol. 7, p. 266-274 (Article in journal)
Andreas Löfberg, Nicholas Harp, Irene Perini, Robin Kämpe, Hanna Karlsson, Michal Pietrzak, Hedy Kober, Markus Heilig (2026) Neuropsychopharmacology (Article in journal)
Sohaib Qazi, Tamara Bianchessi, Federica Viola, Chiara Trenti, Erik Ylipää, Tino Ebbers, Petter Dyverfeldt (2026) Magnetic Resonance in Medicine (Article in journal)

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